Nextflow workflow report

[trusting_cantor] (resumed run)

Workflow execution completed successfully!
Run times
17-Aug-2022 21:03:01 - 18-Aug-2022 07:36:35 (duration: 10h 33m 34s)
  795 succeeded  
  546 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run nf-core/sarek -r 3.0 -profile cfc --input ../samplesheet_rest.csv --outdir ./results_rest --genome GATK.GRCh38 -with-trace -c /home-link/iizha01/trace.config -c custom.config --split_fastq 50000000 -resume
CPU-Hours
1'918.2 (82.1% cached)
Launch directory
/sfs/7/workspace/ws/iizha01-sarek_3_0_experiments-0/experiment_bam_vs_cram/CRAM_I
Work directory
/sfs/7/workspace/ws/iizha01-sarek_3_0_experiments-0/experiment_bam_vs_cram/CRAM_I/work
Project directory
/home-link/iizha01/.nextflow/assets/nf-core/sarek
Script name
main.nf
Script ID
e3f1566408f19677bd01fba97a601922
Workflow session
9fd45d9d-7431-4dd3-89f8-6bcc3b6d7d8e
Workflow repository
https://github.com/nf-core/sarek, revision 3.0 (commit hash 5bb160ddb2cee50c811585e450b16cba13c95a02)
Workflow profile
cfc
Nextflow version
version 22.04.3, build 5703 (18-05-2022 19:22 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)